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Table 3 Convergent genes across all rodent studies

From: The endogenous and reactive depression subtypes revisited: integrative animal and human studies implicate multiple distinct molecular mechanisms underlying major depressive disorder

Probe Set ID Gene symbol RP/Rsum PFP P-value
1034_at TIMP3 10.3564 1.0512 0.6398
1035_g_at TIMP3 10.788 0.9069 0.7097
1235_at YWHAZ 8.1361 1.8677 0.2436
2018_at GJA1 10.6102 0.9224 0.6818
296_at TUBB2A 8.1718 1.4332 0.2493
297_g_at TUBB2A 10.38 0.9872 0.6438
32254_at VAMP2 9.7002 0.0024 0.5228
32531_at GJA1 5.6354 0.4128 0.018
32572_at USP9X 9.6037 1.0556 0.5049
32761_at SRRM2 11.6727 0.9074 0.8285
34387_at LPGAT1 10.5963 0.9769 0.6796
34642_at YWHAZ 6.7492 0.8804 0.0766
36307_at ARC 8.5526 1.0273 0.3127
36760_at YWHAZ 9.8422 0.9712 0.5489
38211_at ZBTB20 8.6008 0.8204 0.321
38710_at OTUB1 9.566 1.145 0.4978
39331_at TUBB2A 8.2579 1.2097 0.263
39725_at RBM39 10.946 0.888 0.7336
40096_at ATP5A1 8.5727 0.9088 0.3161
40125_at CANX 8.2587 1.0086 0.2631
968_i_at USP9X 11.0827 0.8662 0.7532
  1. The expression profile of these genes is tagged by 21 probe sets. Expression differences between cases and control were evaluated using the RankProd algorithm using probability of false positive (PFP) of less the 0.05 to control for the number of multiple testing. The table shows Probe Set ID, Gene Symbol, RankProd value, corrected PFP value and uncorrected -value. The only gene that survives correction for multiple testing in the human analysis is the VAMP-2 gene.