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Table 3 Convergent genes across all rodent studies

From: The endogenous and reactive depression subtypes revisited: integrative animal and human studies implicate multiple distinct molecular mechanisms underlying major depressive disorder

Probe Set ID

Gene symbol

RP/Rsum

PFP

P-value

1034_at

TIMP3

10.3564

1.0512

0.6398

1035_g_at

TIMP3

10.788

0.9069

0.7097

1235_at

YWHAZ

8.1361

1.8677

0.2436

2018_at

GJA1

10.6102

0.9224

0.6818

296_at

TUBB2A

8.1718

1.4332

0.2493

297_g_at

TUBB2A

10.38

0.9872

0.6438

32254_at

VAMP2

9.7002

0.0024

0.5228

32531_at

GJA1

5.6354

0.4128

0.018

32572_at

USP9X

9.6037

1.0556

0.5049

32761_at

SRRM2

11.6727

0.9074

0.8285

34387_at

LPGAT1

10.5963

0.9769

0.6796

34642_at

YWHAZ

6.7492

0.8804

0.0766

36307_at

ARC

8.5526

1.0273

0.3127

36760_at

YWHAZ

9.8422

0.9712

0.5489

38211_at

ZBTB20

8.6008

0.8204

0.321

38710_at

OTUB1

9.566

1.145

0.4978

39331_at

TUBB2A

8.2579

1.2097

0.263

39725_at

RBM39

10.946

0.888

0.7336

40096_at

ATP5A1

8.5727

0.9088

0.3161

40125_at

CANX

8.2587

1.0086

0.2631

968_i_at

USP9X

11.0827

0.8662

0.7532

  1. The expression profile of these genes is tagged by 21 probe sets. Expression differences between cases and control were evaluated using the RankProd algorithm using probability of false positive (PFP) of less the 0.05 to control for the number of multiple testing. The table shows Probe Set ID, Gene Symbol, RankProd value, corrected PFP value and uncorrected -value. The only gene that survives correction for multiple testing in the human analysis is the VAMP-2 gene.