Table 3 Genes that were expected to be expressed in stria vascularis.

From: Macrophage invasion contributes to degeneration of stria vascularis in Pendred syndrome mouse model

			Slc26a4 ^+/+		Slc26a4 ^-/-
No.	Gene	Description	Intensity	P	Intensity	P	Fold	Direction
1	Slc12a1	Na⁺/2Cl^-/K⁺ cotransporter	14,664	12/12	10,656	12/12	1.33	down
2	Atp1a1	Na⁺/K⁺ ATPase, alpha	7,276	9/15	5,440	9/15	2.06	down
3	Atp1b1	Na⁺/K⁺ ATPase, beta1	10,593	12/18	8,587	12/18	1.20
4	Atp1b2	Na⁺/K⁺ ATPase, beta2	8,057	6/6	5,984	6/6	1.41	down
5	Kcnq1	K⁺ channel, alpha	858	15/24	542	11/24	2.48	down
6	Kcne1	K⁺ channel, beta	9,042	6/6	3,490	6/6	2.60	down
7	Kcnma1	K⁺ channel, BK	270	10/18	159	9/18	1.72	down
8	Kcnk1	K⁺ channel	2,667	6/6	1,670	6/6	1.92	down
9	Slc26a4	Pendrin	1,136	3/3	619	3/3	1.84	down
10	Kcnj10	K⁺ channel	17,169	3/3	17,005	3/3	1.01
11	Car2	Carbonic anhydrase	9,139	3/3	9,167	3/3	1.00
12	Gjb2	Connexin 26	12,785	3/3	12,629	3/3	1.01
13	Gjb6	Connexin 30	15,257	3/3	13,060	3/3	1.17
14	Sod1	Superoxide dismutase	4,149	14/15	3,538	14/15	1.21
15	Cat	Catalase	3,520	6/6	4,686	6/6	1.12
16	Gpx1	Glutathione peroxidase	2,633	3/3	4,320	3/3	1.64	up
17	Gpx3	Glutathione peroxidase	12,526	3/3	9,898	3/3	1.27
18	Gpx4	Glutathione peroxidase	11,224	6/6	10,421	6/6	1.06
19	Tyr	Tyrosinase	3,520	6/6	4,686	6/6	1.16

Genes that are expected to be expressed in marginal and spindle cells of stria vascularis (1–9) and genes that are expected to be expressed in intermediate and basal cells of stria vascularis (10–19) are listed. For parameters 'P', 'Fold' and 'Direction', see the Gene array section in Methods. Fold changes are given when a gene was called Present (P) in Slc26a4 ^+/- or Slc26a4 ^-/- samples in at least half of the available probes. The direction of the fold change is only given when it exceeded 1.30. Fold changes lower than 1.30 were not considered significant.

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