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Table 4 Genes that were not expected to be expressed in stria vascularis.

From: Macrophage invasion contributes to degeneration of stria vascularis in Pendred syndrome mouse model

    Slc26a4 +/+ Slc26a4 -/-   
No. Gene Description Intensity P Intensity P Fold Direction
1 Pres Prestin 53 0/3 8 0/3   
2 Kcnq4 K+ channel 160 0/6 160 0/6   
3 Atp2b2 PMCA2 35 0/9 116 3/9   
4 Calb1 Calbinin 28K 53 0/12 36 0/12   
5 Calb2 Calretinin 28 0/3 27 0/3   
6 Ache Acetylcholinesterase 57 0/3 5 0/3   
7 Slc1a3 Glutamate transporter GLAST 122 3/18 154 8/18   
8 Gria1 Glutamate receptor, ionotropic 57 0/9 55 0/9   
9 Atp6v1b1 H+ ATPase 58 0/3 26 0/3   
10 Tecta Tectorin, alpha 62 0/3 52 0/3   
11 Tectb Tectorin, beta 90 0/3 01 0/3   
12 Otog Otogelin 230 0/3 63 0/3   
13 Otof Otoferlin 231 0/3 214 0/3   
14 Otop1 Otopetrin 1 54 0/3 62 1/3   
15 Otop2 Otopetrin 2 247 0/3 203 0/3   
16 Otop3 Otopetrin 3 60 0/3 47 0/3   
17 Otos Otospiralin 636 3/3 2,368 3/3 3.73 up
18 Slc4a7 Na+/HCO3 - cotransporter 398 3/3 444 3/3 1.11  
19 Kcnj16 K+ channel 280 2/6 239 1/6   
  1. Genes that are expected to be expressed in the organ of Corti, the modiolus or the vestibular labyrinth but not in stria vascularis (1–16), and genes that are expected to be expressed in spiral ligament but not in stria vascularis (17–19) are listed. For parameters 'P', 'Fold' and 'Direction', see the Gene array section in Methods. Fold changes are given when a gene was called Present (P) in Slc26a4 +/- or Slc26a4 -/- samples in at least half of the available probes. The direction of the fold change is only given when it exceeded 1.30. Fold changes lower than 1.30 were not considered significant.