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Table 2 Interactions and risk subgroups identified by CART with a P-value less than 5%

From: Methodological issues in detecting gene-gene interactions in breast cancer susceptibility: a population-based study in Ontario

Rank

Interaction

P-value

1

XPD-[Lys751Gln]

IL10-[G(-1082)A]

0.006

2

CYP17-[C(518)T]

BARD1-[Pro24Ser]

0.013

3

XPD-[Lys751Gln]

IL10-[G(-1082)A]

IL1A-[Ala114Ser]

ESR1-[Ser10Ser]

0.016

4

CYP17-[C(518)T]

IL13-[Arg130Gln]

IL1A-[Ala114Ser]

MTHFR-[Ala222Val]

PTEN-[(IVS4+109)ins/del5

0.019

5

XPD-[Lys751Gln]

BARD1-[Pro24Ser]

MTHFR-[Ala222Val]

0.020

6

CYP17-[C(518)T]

BARD1-[Pro24Ser]

MTHFR-[Ala222Val]

0.043

7

XPD-[Lys751Gln]

GADD45-[C(IVS3+168)T]

GSTP1-[Ile105Val]

0.050