Table 2 Proportion of sequences belonging to a molecular transmission cluster (MTC) by cohort country and HIV-1 subtype
Country | A | B | C | CRF01_AE | CRF02_AG | Other (D, F, G) | Overall | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MTC N (%) | Not MTC N (%) | MTC N (%) | Not MTC N (%) | MTC N (%) | Not MTC N (%) | MTC N (%) | Not MTC N (%) | MTC N (%) | Not MTC N (%) | MTC N (%) | Not MTC N (%) | MTC N (%) | Not MTC N (%) | Total N (%) | |
Canada | 7 (30.4) | 16 (69.6) | 332 (47.4) | 368 (52.6) | 29 (18.2) | 130 (81.8) | 4 (36.4) | 7 (63.6) | 6 (24.0) | 19 (76.0) | 5 (21.7) | 18 (78.3) | 383 (40.7) | 558 (59.3) | 941 (100.0) |
France | 5 (29.4) | 12 (70.6) | 6 (100.0) | 5 (21.7) | 18 (78.3) | 23 (100.0) | |||||||||
Germany | 4 (12.9) | 27 (87.1) | 869 (62.8) | 514 (37.2) | 5 (20.0) | 20 (80.0) | 7 (17.5) | 33 (82.5) | 14 (29.8) | 33 (70.2) | 2 (12.5) | 14 (87.5) | 901 (58.4) | 641 (41.6) | 1542 (100.0) |
Greece | 2 (16.7) | 10 (83.3) | 5 (23.8) | 16 (76.2) | 1 (100.0) | 1 (100.0) | 7 (20.0) | 28 (80.0) | 35 (100.0) | ||||||
Italy | 4 (57.1) | 3 (42.9) | 164 (16.1) | 854 (83.9) | 10 (100.0) | 3 (100.0) | 4 (18.2) | 18 (81.8) | 16 (43.2) | 21 (56.8) | 188 (17.1) | 909 (82.9) | 1097 (100.0) | ||
Netherlands | 7 (12.1) | 51 (87.9) | 7 (12.1) | 51 (87.9) | 58 (100.0) | ||||||||||
Norway | 6 (14.3) | 36 (85.7) | 165 (43.5) | 214 (56.5) | 25 (23.6) | 81 (76.4) | 13 (28.9) | 32 (71.1) | 9 (27.3) | 24 (72.7) | 8 (40.0) | 12 (60.0) | 226 (36.2) | 399 (63.8) | 625 (100.0) |
UK | 4 (13.3) | 26 (86.7) | 574 (40.1) | 856 (59.9) | 4 (6.9) | 54 (93.1) | 14 (100.0) | 19 (100.0) | 2 (25.0) | 6 (75.0) | 584 (37.5) | 975 (62.5) | 1559 (100.0) | ||
Austria | 23 (28.1) | 59 (72.0) | 301 (42.0) | 429 (58.0) | 21 (18.6) | 48 (81.4) | 12 (16.2) | 62 (83.8) | 18 (25.4) | 53 (74.7) | 35 (49.3) | 36 (50.7) | 410 (37.4) | 687 (62.6) | 1097 (100.0) |
Spain | 18 (54.6) | 15 (45.5) | 918 (51.0) | 881 (49.0) | 7 (43.8) | 9 (56.3) | 5 (100.0) | 38 (42.7) | 51 (57.3) | 8 (22.2) | 28 (77.8) | 989 (50.0) | 989 (50.0) | 1978 (100.0) | |
Total | 68 (26.2) | 192 (73.9) | 3350 (44.4) | 4195 (55.6) | 81 (18.7) | 352 (81.3) | 36 (18.8) | 156 (81.3) | 89 (28.4) | 224 (71.6) | 76 (35.9) | 136 (64.2) | 3700 (41.3) | 5255 (58.7) | 8955 (100.0) |