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Table 1 Protein list of common deregulated proteins achieved in literature and our data

From: Absolute quantitative proteomics using the total protein approach to identify novel clinical immunohistochemical markers in renal neoplasms

Protein name

Gene name

ccRCC/NAT expression

Ref.

Acetyl-CoA acetyltransferase, mitochondrial

ACAT1

Down

[16]

Alcohol dehydrogenase [NADP(+)]

AKR1A1

Down

[26]

Retinal dehydrogenase 1

ALDH1A1

Up

[26]

Fructose-bisphosphate aldolase

ALDOA

Up

[17]

Aminopeptidase N

ANPEP

Down

[27]

Annexin A4

ANXA4

Up

[28]

Annexin A5

ANXA5

Up

[26]

Aquaporin-1

AQP1

Down

[29]

Carbonic anhydrase 9

CA9

Up

[30]

Calbindin

CALB1

Down

[26, 31]

Macrophage-capping protein

CAPG

Up

[32]

Cofilin-1

CFL1

Up

[17]

Coronin-1A

CORO1A

Up

[15]

Dipeptidase 1

DPEP1

Down

[29]

Alpha-enolase

ENO1

Up

[11, 14, 33]

Gamma-enolase

ENO2

Up

[26, 32]

Fatty acid-binding protein, brain

FABP7

Up

[34, 35]

Gelsolin

GSN

Up

[31]

Glutathione S-transferase P

GSTP1

Up

[26]

Heat shock protein beta-1

HSPB1

Up

[11, 14, 32]

Plastin-2

LCP1

Up

[32]

L-lactate dehydrogenase A chain

LDHA

Up

[12, 14]

Galectin-1

LGALS1

Up

[13, 34]

Major vault protein

MVP

Up

[12]

Nucleoside diphosphate kinase A

NME1

Up

[32]

Nicotinamide N-methyltransferase

NNMT

Up

[12, 17, 32, 36]

Profilin-1

PFN1

Up

[13, 17]

Pyruvate kinase PKM

PKM

Up

[37, 38]

Perilipin-2

PLIN2

Up

[12, 15, 39]

Peptidyl-prolyl cis-trans isomerase A

PPIA

Up

[34]

Peroxiredoxin-4

PRDX4

Up

[32]

UV excision repair protein RAD23 homolog B

RAD23B

Up

[11]

Histone-binding protein RBBP7

RBBP7

Up

[32]

Reticulocalbin-1

RCN1

Up

[40]

Protein S100-A10

S100A10

Up

[41]

Protein S100-A11

S100A11

Up

[41, 42]

Plasma protease C1 inhibitor

SERPING1

Up

[12]

Serpin H1

SERPINH1

Up

[43]

ADP/ATP translocase 3

SLC25A6

Down

[26]

Protein-glutamine gamma-glutamyltransferase 2

TGM2

Up

[26]

Triosephosphate isomerase

TPI1

Up

[11]

Tubulin alpha-1B chain

TUBA1B

Up

[32]

Thymidine phosphorylase

TYMP

Up

[12, 32]

Vimentin

VIM

Up

[26, 33, 44];

14-3-3 protein zeta/delta

YWHAZ

Up

[13]