|
N SNPs
|
R2maternal BMI
|
Correlation with outcome risk factorsa
|
---|
Parental occupation
|
Maternal education
|
Paternal education
|
Maternal smoking
|
Parity
|
Paternal BMI
|
Maternal age
|
Paternal age
|
---|
ALSPAC
|
N
| |
5157
|
4807
|
4826
|
4572
|
4891
|
5042
|
3766
|
5157
|
3593
|
Maternal BMIb
| | |
0.11***
|
− 0.12***
|
− 0.11***
|
− 0.01
|
0.06**
|
0.16***
|
0.00c
|
− 0.01c
|
Genetic IV
|
FTO
|
1
|
0.36%
|
0.03*
|
− 0.01
|
− 0.01
|
0.00
|
0.02
|
− 0.01
|
− 0.01
|
0.00
|
Speliotes
|
31
|
0.89%
|
0.02
|
0.00
|
− 0.03*
|
− 0.01
|
0.02
|
0.01
|
0.00
|
0.01
|
Locke
|
87
|
1.02%
|
0.03
|
− 0.01
|
− 0.04*
|
− 0.01
|
0.03*
|
0.01
|
0.00
|
0.00
|
Yengo
|
497
|
2.37%
|
0.04*
|
− 0.04*
|
− 0.05**
|
0.02
|
0.03
|
0.01
|
− 0.02
|
− 0.01
|
Lassosum
|
80939
|
6.61%
|
0.08***
|
− 0.07***
|
− 0.08***
|
0.07***
|
0.02
|
0.03*
|
− 0.08***
|
− 0.06**
|
BiB (SA)
|
N
| |
2267
|
1689
|
2259
|
2258
|
2262
|
2215
|
475
|
2267
|
583
|
Maternal BMIb
| | |
− 0.10**
|
− 0.08**
|
− 0.03
|
0.01
|
0.15***
|
0.12*
|
− 0.02c
|
0.02c
|
Genetic IV
|
FTO
|
1
|
0.77%
|
− 0.01
|
− 0.01
|
0.00
|
− 0.03
|
0.00
|
0.00
|
0.02
|
0.06
|
Speliotes
|
29
|
1.71%
|
− 0.01
|
0.01
|
0.01
|
− 0.04
|
0.00
|
− 0.01
|
0.00
|
− 0.05
|
Locke
|
82
|
1.33%
|
− 0.04
|
0.02
|
0.03
|
− 0.05*
|
− 0.01
|
− 0.06
|
0.00
|
0.02
|
Yengo
|
446
|
1.64%
|
− 0.04
|
− 0.04*
|
0.01
|
0.01
|
0.01
|
− 0.03
|
− 0.02
|
− 0.03
|
Lassosum
|
79101
|
3.46%
|
− 0.01
|
− 0.02
|
− 0.02
|
0.01
|
− 0.02
|
− 0.04
|
− 0.04
|
− 0.06
|
BiB (WE)
|
N
| |
2000
|
1587
|
2000
|
1999
|
1999
|
1951
|
639
|
2000
|
788
|
Maternal BMIb
| | |
− 0.09**
|
− 0.07*
|
0.01
|
0.01
|
0.11***
|
0.22***
|
0.00c
|
0.04c
|
Genetic IV
|
FTO
|
1
|
0.56%
|
0.03
|
0.02
|
− 0.01
|
0.00
|
0.00
|
0.03
|
0.00
|
− 0.02
|
Speliotes
|
31
|
0.92%
|
0.05
|
0.01
|
0.03
|
− 0.03
|
0.00
|
0.02
|
0.00
|
− 0.01
|
Locke
|
86
|
1.16%
|
0.03
|
0.00
|
0.04
|
− 0.01
|
− 0.01
|
0.04
|
− 0.02
|
− 0.02
|
Yengo
|
453
|
1.78%
|
− 0.01
|
0.00
|
0.05*
|
0.01
|
0.00
|
0.00
|
− 0.03
|
0.00
|
Lassosum
|
79101
|
5.21%
|
− 0.08*
|
− 0.05*
|
0.04
|
0.07*
|
0.04
|
0.03
|
− 0.07*
|
0.01
|
- aPearson correlation coefficients are presented here to give an indication of the direction and magnitude of associations; full regression results are presented in Additional file 1: Supplementary information S16–S19, * P < 0.05, ** P < 0.001, *** P < 1e−5. bAge-standardised z-scores for maternal BMI, as per the primary analyses. cMaternal BMI is not correlated with maternal or paternal age because it was age-standardised. SA South Asians, WE White Europeans, R2 proportion of maternal BMI variance explained by the IV (maternal non-transmitted allele scores), FTO rs9939609 at the FTO locus, Speliotes, Locke, Yengo PRS calculated from SNPs that reached genome-wide significance in the BMI GWAS with the indicated first author, Lassosum PRS calculated by the lassosum method