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Table 2 List of differentially expressed autosomal coding genes between type 1 diabetes-exposed offspring and controls

From: Epigenetic and transcriptomic alterations in offspring born to women with type 1 diabetes (the EPICOM study)

Gene ID

External gene name

Log2 fold change

Log CPM

P-value

Chromosome name

Start position

End position

ENSG00000103148.11

NPRL3

1.402

4.682

0.0003637

16

134273

188859

ENSG00000036448.5

MYOM2

1.238

3.216

0.001291

8

1993155

2113475

ENSG00000163735.6

CXCL5

0.778

3.821

0.0003347

4

74861359

74864496

ENSG00000120885.15

CLU

0.754

3.931

7.9319E−05

8

27454434

27472548

ENSG00000259207.3

ITGB3

0.729

5.136

0.001563

17

45331212

45421658

ENSG00000005961.13

ITGA2B

0.696

3.951

0.003207

17

42449548

42466873

ENSG00000184922.9

FMNL1

0.687

5.329

0.004019

17

43298811

43324687

ENSG00000161911.7

TREML1

0.682

1.937

0.001432

6

41117080

41122075

ENSG00000113140.6

SPARC

0.670

4.702

0.0003625

5

151040657

151066726

ENSG00000175746.4

C15orf54

0.670

2.299

0.003372

15

39542885

39547046

ENSG00000138798.7

EGF

0.650

3.438

0.0008035

4

110834040

110933422

ENSG00000122786.15

CALD1

0.642

2.518

0.004715

7

134429003

134655479

ENSG00000100385.9

IL2RB

0.610

3.173

0.001113

22

37521878

37571094

ENSG00000082781.7

ITGB5

0.566

3.489

0.002852

3

124480795

124620265

ENSG00000198478.6

SH3BGRL2

0.565

6.232

0.0013672

6

80341000

80413372

ENSG00000168497.4

SDPR

0.564

6.971

0.001083

2

192699028

192711981

ENSG00000151693.5

ASAP2

0.564

2.812

0.0004620

2

9346894

9545812

ENSG00000185909.10

KLHDC8B

0.549

2.620

0.001593

3

49209044

49213917

ENSG00000140022.5

STON2

0.547

4.040

4.5483E−05

14

81727000

81902809

ENSG00000019582.10

CD74

0.545

6.485

0.003180

5

149781200

149792492

ENSG00000101162.3

TUBB1

0.516

7.425

0.001578

20

57594309

57601709

ENSG00000090975.8

PITPNM2

0.506

2.549

0.002654

12

123468027

123634562

ENSG00000095303.10

PTGS1

0.505

5.532

0.0005005

9

125132824

125157982

ENSG00000111644.3

ACRBP

0.497

2.010

0.001323

12

6747241

6756626

ENSG00000169313.9

P2RY12

0.483

3.076

0.003989

3

151055168

151102600

ENSG00000163737.3

PF4

0.471

4.875

0.004818

4

74846794

74847841

ENSG00000141522.7

ARHGDIA

0.459

3.114

0.003189

17

79825597

79829282

ENSG00000054793.9

ATP9A

0.441

3.264

0.002419

20

50213053

50385173

ENSG00000107438.4

PDLIM1

0.440

3.137

0.004217

10

96997329

97050781

ENSG00000143368.9

SF3B4

0.429

2.080

0.004332

1

149895209

149900236

ENSG00000153071.10

DAB2

0.419

4.220

0.0003941

5

39371780

39462402

ENSG00000067225.13

PKM

0.401

6.571

0.0002313

15

72491370

72524164

ENSG00000143537.9

ADAM15

0.399

2.580

0.001539

1

155023042

155035252

ENSG00000146192.10

FGD2

0.387

5.061

0.003886

6

36973422

36996846

ENSG00000177830.13

CHID1

0.361

2.254

0.002612

11

867357

915058

ENSG00000157823.12

AP3S2

0.339

3.560

0.004107

15

90373831

90437574

ENSG00000075624.9

ACTB

0.335

9.389

0.003498

7

5566782

5603415

ENSG00000172757.8

CFL1

0.309

6.236

0.000952

11

65590493

65629497

ENSG00000185261.9

KIAA0825

−0.383

5.944

0.002067

5

93488671

93954309

  1. Displayed are genes with a crude p-value<0.005 and a log fold change≥0.3