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Table 1 List of antibody biomarkers for atherosclerosis

From: Serum anti-DIDO1, anti-CPSF2, and anti-FOXJ2 antibodies as predictive risk markers for acute ischemic stroke

Abbreviated name

Accession number

Full name

Screening method

Reference

DIDO1

BC000770.1

Death inducer obliterator-1

Protein array

This report

CPSF2

NM_017437.1

Cleavage and polyadenylation specific factor 2, 100 kDa

Protein array

This report

FOXJ2

NM_018416.2

Forkhead box J2

Protein array

This report

ACTR3B

NM_020445.6

ARP3 actin-related protein 3 homolog B

SEREX

[40]

ADAMTS7

NM_014272.3

ADAM metallopeptidase with thrombospondin type 1 motif, 7

SEREX

 

AR141352

NM_133494

NIMA (never in mitosis gene a)-related kinase 7

SEREX

 

ASXL2

NM_018263.6

Additional sex combs-like 2

SEREX

[43]

ATP2B4

NM_001001396.2

ATPase, Ca++ transporting, plasma membrane 4

Protein array

[54]

BAZ1B

NM_032408

Bromodomain adjacent to zinc finger domain, 1B

SEREX

 

BMP1

NM_006129.4

Bone morphogenetic protein 1

SEREX

[39, 54]

CBX1

NM_001127228

Chromobox homolog 1

SEREX

[41]

CBX5

NM_012117

Chromobox homolog 5

SEREX

[41]

CCNG2

NM_004354.3

Cyclin G2

Protein array

[48]

CEP290

NM_014684

Centrosomal protein 290 kDa

SEREX

 

CLDND1

NM_001040181

Claudin domain containing 1

Protein array

[48]

COPE

CR456886

Coatomer protein complex subunit epsilon

SEREX

[36]

CRIM1

NM_016441.2

Cysteine-rich transmembrane BMP regulator 1 (chordin-like)

SEREX

 

CTNNA1

NM_001903.5

Catenin alpha 1

SEREX

[40]

CTNND1

NM_001085458

Catenin delta 1

Protein array

[48]

DEF8

NM_207514

Differentially expressed in FDCP 8 homolog (mouse)

SEREX

 

DHPS

NM_001930

Deoxyhypusine synthase

Protein array

[55]

DNAJA1

NM_001539

DnaJ heat shock protein family (Hsp40) member A1

SEREX

[42]

DNAJC2

NM_014377

DnaJ heat shock protein family (Hsp40) member C2

SEREX

[42]

DST

NM_015548

Dystonin

SEREX

 

EEF1A1

NM_001402.5

Eukaryotic translation Elongation factor 1 alpha 1

SEREX

[56]

EEF1G

NM_001404.4

Eukaryotic translation elongation factor 1 gamma

SEREX

 

EIF2A

NM_032025.3

Eukaryotic translation initiation factor 2A, 65 kDa

SEREX

 

FER1L3

NM_133337

Myoferlin

SEREX

 

GOPC

NM_001017408

Golgi associated PDZ and coiled-coil motif containing

SEREX

 

H3F3B

NM_005324

H3 histone, family 3B

SEREX

 

HM13

AF483215

Histocompatibility (minor) 13

SEREX

 

HSPA8

NM_006597

Heat shock 70 kDa protein 8

SEREX

 

HSPB1

NM_001540.3

Heat shock 27 kDa protein 1

SEREX

 

KIAA0020

NM_014878

KIAA0020

SEREX

[56]

LGALS9

NM_009587

Galectin 9

SEREX

[39]

LRPAP1

NM_002337

Low-density lipolipoprotein receptor–related protein–associated protein 1

SEREX

[57]

MAGT1

NM_032121.5

Magnesium transporter 1

SEREX

 

MMP1

NM_002421

Metalloproteinase 1

SEREX

[41]

MYBBP1A

NM_001105538

MYB binding protein 1a

Protein array

[48]

NAV2

NM_145117.4

Neuron navigator 2

SEREX

 

PARC

NM_015089

p53-associated parkin-like cytoplasmic protein

SEREX

 

PDCD11

NM_014976.2

Programmed cell death 11

SEREX

[40, 58]

PFKFB3

NM_004566

6-Phosphofructo-2-kinase/Fructose-2,6-biphosphatase 3

SEREX

 

PHF20

NM_016436

PHD finger protein 20

SEREX

 

PPP1R15A

NM_014330

Protein phosphatase 1 regulatory subunit 15A

SEREX

[39, 59]

PRCP

NM_005040.1

Prolylcarboxypeptidase

Protein array

[60]

PSAP

NM_002778

Prosaposin

SEREX

 

RANBP2L1

NM_005054

RAN binding protein 2-like 1

SEREX

 

RBCK1

NM_031229

RanBP-type and C3HC4-type zinc finger containing 1

SEREX

 

RBPJ

NM_005349

Recombination signal binding protein for immunoglobulin kappa J region

SEREX

 

ROCK1

NM_005406

Rho-associated, coiled-coil containing protein kinase 1

SEREX

 

RPA1

NM_002945

Replication protein A1

SEREX

 

RPA2

NM_002946

Replication protein A2

SEREX

[39]

RPL3 R

NM_000967

Ribosomal protein L3t

SEREX

 

SC65

BC007942

Synaptonemal complex protein SC65

SEREX

[39]

SH3BP5

NM_004844

SH3 domain-binding protein 5

Protein array

[51]

SMARCA4

NM_001128847

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

SEREX

 

SNX16

NM_022133.4

Sorting Nexins 16

SEREX

[37]

SOSTDC1

NM_015464

Sclerostin domain containing 1

Protein array

[48]

SPARC

NM_003118

Secreted protein acidic and cysteine-rich

SEREX

 

SPOCK1

NM_004598

SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1

SEREX

[56]

TBC1D2

NM_001267571

TBC1 domain family, member 2

SEREX

 

TBC1D4

NM_014832

TBC1 domain family, member 4

SEREX

 

TEX261

NM_144582

Testis expressed 261

SEREX

 

TFAM

NM_003201

Transcription factor A, mitochondrial

Protein array

[48]

THBS1

NM_003246

Thrombospondin 1

SEREX

 

TMEFF1

NM_003692

Transmembrane protein with EGF-like and two follistatin-like domains 1

SEREX

 

TOP3B

NM_003935

DNA topoisomerase III beta

Protein array

[48]

TUBB2C

NM_006088

Tubulin, beta 2C

SEREX

[56]

TYMS

NM_001071

Thymidylate synthetase

SEREX

 

WDR36

NM_139281.2

T cell activation WD repeat protein

SEREX

[39]

XPO1

NM_003400.3

Exportin 1

SEREX

 

XRCC4

NM_022406

X-ray repair cross complementing 4

SEREX

 

ZFP36L1

NM_004926

ZFP36 ring finger protein like 1

SEREX