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Table 1 Clinical parameters associated with the patients whose biopsies were analysed with dual RNA-seq and used to build the host-pathogen interactome in NSTI

From: Analysis of host-pathogen gene association networks reveals patient-specific response to streptococcal and polymicrobial necrotising soft tissue infections

 

Monomicrobial NSTI

Polymicrobial NSTI

Age (years)

57 (44–61)

55 (46.5–64)

Sex

 Female/male (%)

12 (34.3%)/ 23 (65.7%)

9 (39.2%)/ 14 (60.8%)

Outcome

 Mortality 30 days (%)

1 (2.86%)

4 (17.4%)

 Mortality 90 days (%)

3 (8.57%)

4 (17.4%)

 Mortality 365 days (%)

6 (17.14%)

6 (26.1%)

Hospital

 Righospitalet Copenhagen

13 (15)/35 (42)

11 (11)/ 24 (25)

 Karolinska University Hospital

7 (8)/35 (42)

8 (8)/ 24 (25)

 Sahlgrenska University Hospital

5 (6)/35 (42)

2 (2)/ 24 (25)

 University of Bergen

10 (13) /35 (42)

2 (3)/ 24 (25)

Laboratory values

 Haemoglobin (g/dl)

10.5 (2.51–11.76)

8.8 (7.9–10.55)

 White blood cells (10^9/l)

13.4 (11.15–16.625)

12.3 (8.7–15.7)

 C-reactive protein (mg/l)

207 (152–293.25)

293 (140–343)

 Creatinine (μmol/l)

123 (87.75–233.75)

116.5 (81.25–180.75)

 SOFA score

9 (5–11)

8 (6–11)

 SAPS II

40 (35–51)

40.5 (29–48)

Location of infection in patients

 Head and neck (%)

7 (20%)

9 (39.1%)

 Upper extremities including thoracic involvement (%)

14 (40%)

3 (13%)

 Abdomen and ano-genital area (%)

5 (14.3%)

12 (52.2%)

 Lower extremities (%)

15 (42.9%)

5 (21.7%)

  1. Median and Interquartile ranges (Lower Quartile – Upper Quartile) are given. Under the section “Hospital”, the number of patients admitted to and the number of biopsies taken (in brackets) from the hospitals are shown. The number of patients may not coincide with the number of biopsies since multiple biopsies can be taken from the same patient. For instance, “13 (15)/35 (42)” means that 13 out of the 35 patients and 15 out of the 42 biopsies were from Righospitalet; since patients can have infection in multiple locations, percentage may not add to 100%