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Table 1 GWAS Summary Statistics of Blood/Urine Biomarkers utilised for cross-trait analysis with endometriosis

From: Polygenic risk score phenome-wide association study reveals an association between endometriosis and testosterone

Trait

Female-specific

Ancestry and sample size

Publication (GWAS Catalog Accession Number)

Apolipoprotein A

No

311,601 European ancestry individuals, 5550 African ancestry individuals, 6682 South Asian ancestry individuals

Sinnott-Armstrong, Tanigawa [12]

GCST90019495

Apolipoprotein B

No

340,860 European ancestry individuals, 5962 African ancestry individuals, 7275 South Asian ancestry individuals

Sinnott-Armstrong, Tanigawa [12]

GCST90019496

Alanine aminotransferase

No

342,387 European ancestry individuals, 6017 African ancestry individuals, 7325 South Asian ancestry individuals

Sinnott-Armstrong, Tanigawa [12]

GCST90019492

Testosterone

Yes

230,454 European ancestry women

Ruth, Day [14]

GCST90012112

Bioavailable Testosterone

Yes

188,507 European ancestry women

Ruth, Day [14]

GCST90012102

Triglycerides (for Genetic Correlation)

No

1,320,016 European ancestry individuals

Graham, Clarke [16]

GCST90239664

Triglycerides (for MR)

No

115,082 European ancestry individuals

Richardson, Sanderson [17]

GCST90092992

Urate

No

342,087 European ancestry individuals, 6011 African ancestry individuals, 7328 South Asian ancestry individuals

Sinnott-Armstrong, Tanigawa [12]

GCST90019524

HDL Cholesterol

No

313,372 European ancestry individuals, 5573 African ancestry individuals, 6689 South Asian ancestry individuals

Sinnott-Armstrong, Tanigawa [12] GCST90019510

LDL Cholesterol

No

341,875 European ancestry individuals, 6003 African ancestry individuals, 7319 South Asian ancestry individuals

Sinnott-Armstrong, Tanigawa [12]

GCST90019512

Sex hormone-binding globulin

Yes

189,473 European ancestry women

Ruth, Day [14]

GCST90012107

Albumin

No

313,032 European ancestry individuals, 5573 African ancestry individuals, 6687 South Asian ancestry individuals

Sinnott-Armstrong, Tanigawa [12]

GCST90019493

Calcium

No

313,387 European ancestry individuals, 5576 African ancestry individuals, 6696 South Asian ancestry individuals

Sinnott-Armstrong, Tanigawa [12]

GCST90019500

  1. MR Mendelian randomisation